Vol. 1 No. 1 (2024): Natural Sci. Rev.
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Vol. 1 No. 1 (2024): Natural Sci. Rev.

Vol. 1 No. 1 (2024)

October - December 2024

Natural Sci. Rev. 1 7 (2024) DOI: 10.54546/NaturalSciRev.100107
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Physics Life Sciences Interdisciplinary Research
DOI: 10.54546/NaturalSciRev.100107

Photon and neutron-based techniques for studying membrane dynamics and protein aggregation in lipid–protein interactions

Lipid–protein interactions are central to maintaining the structural and functional balance of biological membranes, influencing a wide array of cellular processes. These interactions, however, become pathological in neurodegenerative diseases (NDDs), such as Alzheimer’s, Parkinson’s, and Huntington’s diseases. In these disorders, the misfolding and aggregation of proteins like amyloid-beta (Aβ), alphasynuclein (α-syn), and mutant huntingtin (mHTT) disrupt the lipid bilayer, compromising membrane integrity, fluidity, and signaling. In this review we explore the critical role of lipid–protein interactions in NDDs, emphasizing how protein misfolding leads to toxic aggregates that embed into membranes, triggering neurotoxic events. Advanced spectroscopic techniques have been instrumental in studying these molecular interactions. Photon-based methods, including Förster resonance energy transfer (FRET), circular dichroism (CD), and Raman spectroscopy, provide real-time insights into protein aggregation and lipid membrane dynamics. Neutron-based techniques, such as neutron reflectometry and small-angle neutron scattering (SANS), further enhance the resolution of lipid–protein interactions, particularly in the context of neurodegenerative aggregation. Moreover, the review highlights the significance of lipid microdomains, particularly cholesterol-rich lipid rafts, which act as platforms for protein aggregation, influencing disease progression. Therapeutic strategies aimed at targeting these lipid–protein interfaces are also discussed, with a focus on how spectroscopic insights have driven the development of drugs that stabilize membrane integrity or prevent toxic aggregation. Finally, the integration of spectroscopy with computational models, such as molecular dynamics (MD) simulations, is proposed as a promising approach to further unravel the complex dynamics of lipid–protein interactions, providing a more complete picture of disease mechanisms.
K. Z. Mamatkulov, H. A. Esawii, G. M. Arzumanyan
Natural Sci. Rev. 1 1 (2024) DOI: 10.54546/NaturalSciRev.100101
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Physics
DOI: 10.54546/NaturalSciRev.100101

Technical Design Report of the Spin Physics Detector at NICA: et al. (SPD  Collaboration).

The Spin Physics Detector Collaboration proposes to install a universal detector in the second interaction point of the NICA collider under construction (JINR, Dubna) to study the spin structure of the proton and deuteron and other spin-related phenomena using a unique possibility to operate with polarized proton and deuteron beams at a collision energy up to 27 GeV and a luminosity up to 10 32 cm −2 s −1 . As the main goal, the experiment aims to provide access to the gluon TMD PDFs in the proton and deuteron, as well as the gluon transversity distribution and tensor PDFs in the deuteron, via the measurement of specific single- and double-spin asymmetries using different complementary probes, such as charmonia, open charm, and prompt photon production processes. Other polarized and unpolarized physics is possible, especially at the first stage of NICA operation with reduced luminosity and collision energy of the proton and ion beams. This paper is dedicated exclusively to technical issues of the SPD setup construction. Corrected: 5 February 2025 (the surname of one of the authors was initially misspelled (M. Bolsunovskya), the correct spelling is M. Bolsunovskaya). 23 April 2025 (the surname of one of the authors was initially misspelled (A. Seleznev), the correct spelling is A. Selezenev).
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Datta, D. Dedovich, M. Demichev, G. Deng, I. Denisenko, O. Denisov, T. Derbysheva, D. Derkach, A. Didorenko, M.-O. Dima, A. Doinikov, S. Doronin, V. Dronik, F. Dubinin, V. Dunin, A. Durum, A. Egorov, R. El-Kholy, T. Enik, D. Ermak, D. Erofeev, A. Erokhin, D. Ezhov, O. Fedin, Ju. Fedotova, G. Feofilov, Yu. Filatov, S. Filimonov, V. Frolov, K. Galaktionov, A. Galoyan, A. Garkun, O. Gavrishchuk, S. Gerasimov, M. Gilts, L. Gladilin, G. Golovanov, S. Golovnya, V. Golovtsov, A. Golubev, S. Golubykh, P. Goncharov, A. Gongadze, N. Greben, A. Gregoryev, D. Gribkov, A. Gridin, K. Gritsay, D. Gubachev, J. Guo, Yu. Gurchin, A. Gurinovich, Yu. Gurov, A. Guskov, D. Gutierrez, F. Guzman, A. Hakobyan, D. Han, S. Harkusha, Sh. Hu, S. Igolkin, A. Isupov, A. Ivanov, N. Ivanov, V. Ivantchenko, Sh. Jin, S. Kakurin, N. Kalinichenko, Y. Kambar, A. Kantsyrev, I. Kapitonov, V. Karjavine, A. Karpishkov, A. Katcin, G. Kekelidze, D. Kereibay, S. Khabarov, P. Kharyuzov, H. Khodzhibagiyan, E. Kidanov, E. Kidanova, V. Kim, A. Kiryanov, I. Kishchin, E. Kokoulina, A. Kolbasin, V. Komarov, A. Konak, Yu. Kopylov, M. Korjik, M. Korotkov, D. Korovkin, A. Korzenev, B. Kostenko, A. Kotova, A. Kotzinian, V. Kovalenko, N. Kovyazina, M. Kozhin, A. Kraeva, V. Kramarenko, A. Kremnev, U. Kruchonak, A. Kubankin, O. Kuchinskaia, Yu. Kulchitsky, S. Kuleshov, A. Kulikov, V. Kulikov, V. Kurbatov, Zh. Kurmanaliev, Yu. Kurochkin, S. Kutuzov, E. Kuznetsova, I. Kuyanov, E. Ladygin, V. Ladygin, D. Larionova, V. Lebedev, R. Lednicki, M. Levchuk, P. Li, X. Li, Y. Li, A. Livanov, A. Lobanov, A. Lobko, K. Loshmanova, S. Lukashevich, E. Luschevskaya, A. L’vov, I. Lyashko, V. Lysan, V. Lyubovitskij, D. Madigozhin, V. Makarenko, N. Makarov, R. Makhmanazarov, V. Maleev, D. Maletic, A. Malinin, A. Malkhasyan, A. Maltsev, N. Maltsev, M. Malyshev, O. Mamoutova, A. Manakonov, A. Marova, M. Merkin, I. Meshkov, V. Metchinsky, O. Minko, Yu. Mitrankov, M. Mitrankova, A. Mkrtchyan, H. Mkrtchyan, R. Mohamed, A. Morozikhin, S. Morozova, E. Mosolova, V. Mossolov, S. Movchan, Y. Mukhamejanov, A. Mukhamejanova, E. Muzyaev, D. Myktybekov, S. Nagorniy, M. Nassurlla, P. Nechaeva, M. Negodaev, V. Nesterov, M. Nevmerzhitsky, G. Nigmatkulov, D. Nikiforov, V. Nikitin, A. Nikolaev, D. Oleynik, V. Onuchin, I. Orlov, A. Orlova, G. Ososkov, D. Panzieri, B. Parsamyan, V. Pavlov, P. Pavzderin, M. Pedraza, V. Perelygin, D. Peshkov, A. Petrosyan, M. Petrov, V. Petrov, K. Petrukhin, A. Piskun, S. Pivovarov, I. Polishchuk, P. Polozov, V. Polyanskii, A. Ponomarev, V. Popov, V. Popov, S. Popovich, D. Prokhorova, N. Prokofiev, F. Prokoshin, A. Puchkov, I. Pudin, E. Pyata, V. Rasin, F. Ratnikov, V. Red’kov, A. Reshetin, S. Reznikov, N. Rogacheva, S. Romakhov, A. Rouba, V. Rudnev, V. Rusinov, D. Rusov, V. Ryltsov, N. Saduyev, A. Safonov, S. Sakhiyev, K. Salamatin, V. Saleev, A. Samartsev, E. Samigullin, O. Samoylov, E. Saprunov, A. Savenkov, A. Seleznev, A. Semak, D. Senkov, A. Sergeev, L. Seryogin, S. Seryubin, A. Shabanov, A. Shahinyan, A. Shavrin, I. Shein, A. Sheremeteva, V. Shevchenko, K. Shilyaev, S. Shimansky, S. Shinbulatov, F. Shipilov, A. Shipilova, S. Shkarovskiy, Dz. Shoukovy, K. Shpakov, I. Shreyber, K. Shtejer, R. Shulyakovsky, A. Shunko, S. Sinelshchikova, A. Skachkova, A. Skalnenkov, A. Smirnov, S. Smirnov, A. Snesarev, E. Soldatov, A. Solin, A. Solin jr., V. Solovtsov, J. Song, D. Sosnov, A. Stavinskiy, D. Stekacheva, E. Streletskaya, M. Strikhanov, O. Suarez, A. Sukhikh, S. Sukhovarov, V. Sulin, R. Sultanov, P. Sun, D. Svirida, E. Syresin, V. Tadevosyan, O. Tarasov, E. Tarkovsky, V. Tchekhovsky, E. Tcherniaev, A. Terekhin, A. Terkulov, V. Tereshchenko, O. Teryaev, P. Teterin, A. Tishevsky, V. Tokmenin, N. Topilin, P. Tsiareshka, A. Tumasyan, G. Tyumenkov, E. Usenko, L. Uvarov, V. Uzhinsky, Yu. Uzikov, F. Valiev, E. Vasilieva, A. Vasyukov, V. Vechernin, A. Verkheev, L. Vertogradov, Yu. Vertogradova, R. Vidal, N. Voitishin, I. Volkov, P. Volkov, A. Vorobyov, H. Voskanyan, H. Wang, Y. Wang, T. Xu, A. Yanovich, I. Yeletskikh, N. Yerezhep, S. Yurchenko, A. Zakharov, N. Zamiatin, J. Zamora-Sa´a, A. Zarochentsev, A Zelenov, E. Zemlyanichkina, M. Zhabitsky, J. Zhang, Zh. Zhang, A. Zhemchugov, V. Zherebchevsky, A. Zhevlakov, N. Zhigareva, J. Zhou, X. Zhuang, I. Zhukov, N. Zhuravlev, A. Zinin, S. Zmeev, D. Zolotykh, E. Zubarev, A. Zvyagina, S. Gerassimov

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